Journal: Theranostics
Article Title: Gut ribotoxic stress responses facilitate dyslipidemia via metabolic reprogramming: an environmental health prediction
doi: 10.7150/thno.88586
Figure Lengend Snippet: Effects of ribosomal inactivation on LDLR mRNA stability in human intestinal cells. (A) HCT-8 cells were treated with the vehicle or 1000 ng/mL RIS-1 for 2 h and then replaced with 5 μM actinomycin D for the indicated time to arrest cellular transcription. Expression levels of LDLR mRNA were measured using reverse transcription-quantitative PCR (RT-qPCR). The underlying boxed blots represent the mRNA measured by conventional RT-PCR. (B) HCT-8 cells were treated with vehicle, 1000 ng/mL RIS-1, or 2 μM RIS-2 for 2 h and examined using a confocal microscope. The microscopic analysis was performed at the original magnification of 1600×; scale bar(s), 20 μm. The right graph shows the relative quantitative values of cytosolic HuR in cells using ImageJ software (*** p < 0.001). (C) HCT-8 cells transfected with the negative control vector or HuR shRNA expression vector (shHuR) were treated with the vehicle, 1000 ng/mL RIS-1, or 2 μM RIS-2 for 2 h. mRNA levels were measured using RT-qPCR. The boxed images show the suppression of HuR mRNA expression by shHuR (*** p < 0.001). (D) A putative scheme for ribosomal inactivation-induced cholesterol uptake. (E) Pearson 's correlation analysis of relationships between transcription levels of critical components of ribosotoxic stress responses and LDLR in the small intestine of diet-induced obese mice (gse199776). Correlation matrix visualization was generated using the corrplot function of the R-package (R Foundation for Statistical Computing, Vienna, Austria. URL: https://www.R-project.org/ ). Correlations of transcriptional expression among genes were interpreted according to a general guideline for Pearson's coefficient value: r > 0.7, high (+); 0.5 < r < 0.7, moderate (+); 0.3 < r < 0.5, moderate (+) or low (+); 0.1 < r < 0.3, low (+); -0.1 < r < 0.1, negligible; -0.3 < r < -0.1, low (-). (F) LDLR expression was assessed in patients with IBD (gse75214; Vemeire 's, n = 194). Based on EGR1, SREBP , or HuR levels, we selected samples exhibiting the 50 highest and 50 lowest levels, which were further compared for LDLR levels. Results are shown as a box-and-whisker plot (Tukey), and asterisks (*) indicate significant differences from the low expression group (* p < 0.05, *** p < 0.001). EGR1, early growth response 1; HuR, human antigen R; IBD, inflammatory bowel disease; LDL, low-density lipoprotein; LDL, low-density lipoprotein receptor; SREBP, sterol regulatory element-binding protein.
Article Snippet: The membranes were then incubated with the following antibodies: rabbit polyclonal anti-human actin antibody (1:1000), rabbit polyclonal anti-human SREPB2 antibody (1:1000), rabbit polyclonal anti-human EGR1 antibody (1:1000), mouse monoclonal anti-human HuR antibody (1:2000), mouse monoclonal anti-human hnRNP antibody (1:2000) (all from Santa Cruz Biotechnology, Santa Cruz, CA, USA), and rabbit polyclonal anti-human LDLR antibody (1:1000) (Cayman Chemical, Ann Arbor, Michigan, USA) for 2 h at room temperature.
Techniques: Expressing, Reverse Transcription, Real-time Polymerase Chain Reaction, Quantitative RT-PCR, Reverse Transcription Polymerase Chain Reaction, Microscopy, Software, Transfection, Negative Control, Plasmid Preparation, shRNA, Generated, Whisker Assay, Binding Assay